BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F01LP1|AL430078
(945 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 1791 0.0
>3x_Contig1409
Length = 9404
Score = 1791 bits (903), Expect = 0.0
Identities = 937/946 (99%), Gaps = 4/946 (0%)
Strand = Plus / Minus
Query: 1 gatctttatcgaagcaaattggagtacctgtttaggaagttcgctctaattcttggctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 gatctttatcgaagcaaattggagtacctgtttaggaagttcgctctaattcttggctta 1563
Query: 61 tgtgcaaagcaaatatgttactcttatatgccaaaaagataatcaaaaagaaaacagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 tgtgcaaagcaaatatgttactcttatatgccaaaaagataatcaaaaagaaaacagaag 1503
Query: 121 aagtaggcgctgtacaatgtgaagccctaaaaagcgttctcaccaacaccttgttccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 aagtaggcgctgtacaatgtgaagccctaaaaagcgttctcaccaacaccttgttccttt 1443
Query: 181 cgctttccaaaccaatttatagaaatacaactatctttatattatcgtgatctctgataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 cgctttccaaaccaatttatagaaatacaactatctttatattatcgtgatctctgataa 1383
Query: 241 ctcatcgcttaaaaagcattttgcaggcatttttcaatatgactacgaggagaggagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 ctcatcgcttaaaaagcattttgcaggcatttttcaatatgactacgaggagaggagata 1323
Query: 301 actaaaaaaaagtagttttgcatcaacctagtttcatgaattacataaactaaaagccgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 actaaaaaaaagtagttttgcatcaacctagtttcatgaattacataaactaaaagccgg 1263
Query: 361 tgttgctgaatgattgcgca-stgatggtatcattaatctctatgagctaccggtttcct 419
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 tgttgctgaatgattgcgcagctgatggtatcattaatctctatgagctaccggtttcct 1203
Query: 420 aatgcatcccatgtagcgtgatgagaaaagggaagggctggaagagctgagccattttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 aatgcatcccatgtagcgtgatgagaaaagggaagggctggaagagctgagccattttgt 1143
Query: 480 gacccatactttaatgtgggatcgggaatctgcgaccgttgtgtttgcccacgctgaaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 gacccatactttaatgtgggatcgggaatctgcgaccgttgtgtttgcccacgctgaaat 1083
Query: 540 ctctaagaaggtagcgtggggatcggaagataatcaacgcttatataagctggaagaata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ctctaagaaggtagcgtggggatcggaagataatcaacgcttatataagctggaagaata 1023
Query: 600 ttttcattcgagtggtagaaaatacgggtcacgtgtttcacgtgacgcananttnttaca 659
|||||||||||||||||||||||||||||||||||||||||||||| | | | |||||
Sbjct: 1022 ttttcattcgagtggtagaaaatacgggtcacgtgtttcacgtgacccgaa--ttttaca 965
Query: 660 tgcaggttatattcttgtttaattatacttatgaagtgcagcacatacggttcaaggaag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 tgcaggttatattcttgtttaattatacttatgaagtgcagcacatacggttcaaggaag 905
Query: 720 tcatattccagttgttgcagtatttcagcaaaacttgatttttcattttctttcttgttg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tcatattccagttgttgcagtatttcagcaaaacttgatttttcattttctttcttgttg 845
Query: 780 cttgtttttttgttgggactattgggatgtggaatctttattattatttttttaaggttt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 cttgtttttttgttgggactattgggatgtggaatctttattattatttttttaaggttt 785
Query: 840 tataaaggtttagtatccaggctttatacaaaaagaacatgcagatgaagacatgatata 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tataaaggtttagtatccaggctttatacaaaaagaacatgcagatgaagacatgatata 725
Query: 900 gagacgcattttgggtttttgccttgaaattactgtatttaacaag 945
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 724 gagacgcatttt-ggtttttgccttgaaattactgtatttaacaag 680
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8742
Number of Sequences: 1807
Number of extensions: 8742
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)